Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALSDSIGDFLARIRNAQLAMHKTTRVLFSKVNSSILKILKDEGYILDYQKEVVGNIPSFVVKLKYYER--------SPVISDIVRVSKPGCRCYSKYKDISKAYNGLGIFIISTSKGVMTDYDAHKLKFGGEILCRVF
1HNW Chain:H ((2-138))
--LTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW
General information:
TITO was launched using:
RESULT:
Template:
1HNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101644 for 956 contacts (-106.3/contact) +
2D Compatibility (PS) -14007 + (NN) -4483 + (LL) 352
1D Compatibility (HY) -11200 + (ID) 3050
Total energy: -134032.0 ( -140.20 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_1HNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HNW-query.scw
PDB file :
Tito_Scwrl_1HNW.pdb
: