Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MECKLVNLSNNDVGTTQLNPLIFSVEQKLSILHDIVRWQLAKRRAGTHKVKGISDVSGTTAKPYSQKRTGRARQGSLRSPQFRGGGVIFGPIVRSHAYSLNKKVRKFGLKVALSLKYLNNQVIILNNLNINVKKTSEMCKYIQNFKFSS---FLIVGDYEDSLLRAARNLHYVNLIKPIGLNVFDILNHECIMLTSDALRYLEGRLL
2ZJQ Chain:C ((25-193))
-----------------------------GVLHEVVTWQLASRRRGTASTRTRAQVSKTGRKMYGQKGTGNARHGDRSVPTFVGGGVAFGPKPRSYDYTLPRQVRQLGLAMAIASRQEGGKLVAVDGFDIADAKTKNFISWAKQNGLDGTEKVLLVTDDENT-RRAARNVSWVSVLPVAGVNVYDILRHDRLVIDAAALEIVEE---
General information:
TITO was launched using:
RESULT:
Template:
2ZJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82814 for 1081 contacts (-76.6/contact) +
2D Compatibility (PS) -17299 + (NN) -3200 + (LL) 2516
1D Compatibility (HY) -11200 + (ID) 3150
Total energy: -115147.0 ( -106.52 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJQ-query.scw
PDB file :
Tito_Scwrl_2ZJQ.pdb
: