Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFTLSWLLEHLETNASLEEITDKLTHIGLEVKDVVDNTKLA-GFIVAKVLEVTPHPNVDKLKLCKVDNGSKILQIVCGANNVREGLKTVLASLGSTLPESNFTIKPTKIRGVLSEGILCSASELMLAQEKSKGIIELSDD-YKVGNKFFNCDP---VIDINVTTNRGDCLSVHGIARDLAATGIGTLN--SLIYSSAIPAHDTGIQDRSKSGMTRSSSINVKVIDGESFISGVYISNVRNKESPRWLKDRLESVGMRSISAIVDITNYIMMSFGRPMHAYDAKKIEGKLIVRKANNGEKFTGLNGKEYLLNNDISVIS----DNNNIHAIAGIIGGKCSKCTLETTDVFLESAWFNPISVTKSSRQLNISTDSSYRFARSVDPGFILDGLHFAAQMIVDLCGGKASNVVFAGSLDEADTKVSFDYQDVNKFGSVSVLPDEMFDILTKLGFSTDKKTENNWNVKVPSWRSDVTIPADLVEEVVRIYGYDKIKEE-----PLIDN--VEVEINTHDNLRVLMISRGFHEVFTWSFMSESIAEKFGYSNKLFIIDNPFNNNFNIMRPSIVPNLLQVTADNIVHGMSDLA-IFEIGPVYDSLDQPKYSLSGIRTGN--NLPRNHYNTDRKIDVFDAKADLIAALELFNVSYGNLTIERAEKEYYHPGKSGTLSFKNKATGYFGELHPNILDLFDIKQKVVGFEMILENMGNLPVSREKFID-YKHQSVKRDFAFIVNRDVEVGKIINMVKKSS-ELITEVFVFDVYHGNNMEPNKMSIALSVTFCSPTHTLIEEEIQKESSAIVNLVHKNTGGILRYT |
| 2AKW Chain:B ((1-779)) | MRVPFSWLKAYVPELESPEVLEERLAGLGFETDRIERVFPIPRGVVFARVLEAHPIPGT-RLKRLVLDAG-RTVEVVSGAENARKGIGVALALPGTELPGLGQKVGERVIQGVRSFGMALSPRELGVG-EYGGGLLEFPEDALPPGTPLSEAWPEEVVLDLEVTPNRPDALGLLGLARDLHALGYALVEPEAALKAEALPL---------------PFALKVEDPEGAPHFTLGYAFGLRVAPSPLWMQRALFAAGMRPINNVVDVTNYVMLERAQPMHAFDLRFVGEGIAVRRAREGERLKTLDGVERTLHPEDLVIAGWRGEESFPLGLAGVMGGAESEVREDTEAIALEVACFDPVSIRKTARRHGLRTEASHRFERGVDPLGQVPAQRRALSLLQALAGARVAEALLEAGSPKPPEAIPFRPEYANRLLGTSYPEAEQIAILKRLGCRVEGEG-PTYRVTPPSHRLDLRLEEDLVEEVARIQGYETIPLALPAFFPAPDNRGVEAPYRKEQRLREVLSGLGFQEVYTYSFMDPEDARRFRLDPPRLLLLNPLAPEKAALRTHLFPGLVRVLKENLDLDRPERALLFEVGRVFREREE--THLAGLLFGEGVGLP---WAKERLSGYFLLKGYLEALFARLGLAF---RVEAQAFPFLHPGVSGRVLVEGEEVGFLGALHPEIAQELELP-PVHLFELRL----PLPDKPLAFQDPSRHPAAFRDLAVVVPAPTPYGEVEALVREAAGPYLESLALFDLYQGPPLPEGHKSLAFHLRFRHPKRTLRDEEVEEAVSRVAEALRARGFGLRGLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -382146 for 6002 contacts (-63.7/contact) +
2D Compatibility (PS) -80631 + (NN) -12321 + (LL) 604
1D Compatibility (HY) -43200 + (ID) 11300
Total energy: -528994.0 ( -88.14 by residue)
QMean score : 0.424
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