Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKLLKKFYGIIYCLYHALIDTIYNDGMEHAGYLSFLILLSIFPFLIVLMALASTFANFLDQYNIGWTFIIDNMPQDILASLMPRIREIISGPP--QSLLTLAIVGAIWT------ASSTIEGLRTILNKAYKVPVSPPYVLRRILSILQFLIITFIITLTIVFSTLVP--MLIDFSYHGLSYTRYLLIEFVLFIVVSWLYFMLPNIRQNVSDVFPGSYIAVMLWTVSASAFKQYLRASFDQLDLIYGSLGGVVVSLLFFYMVSLIFIYGAKFNFQLKCFNGSR |
| 2LSE Chain:A ((1-101)) | ----------------------------------------------------------------------MQEERKKLLEKLEKILDEVTDGAPDEARERIEKLAKDVKDELEEGDAKNMIEKFRDEMEQMYKDA--PNAVMEQLLEEIEKLLKKA--------GSLVPRGSYLEHHHHHH------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LSE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68723 for 576 contacts (-119.3/contact) +
2D Compatibility (PS) -9755 + (NN) -4557 + (LL) 16900
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -68685.0 ( -119.24 by residue)
QMean score : 0.310
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