Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIVLATGGTGGHIFPAITLARAIKRQGYDSILFADKKTGK-NTD-V-KDYTLPLNKPG----------------GNKFRFFL-----LLIYSCVLALYQIRKLKPKLVIGFGGYASFPTLLAAKVLSIPIILHEQNAVLGR---V---NKFFFN-----------SAELIATSFPETKYAK----GNKCVFIGNFVDIKAKSHSS--TKKILTVLIIAGSQGA-NFFDDVVSSVICNLPIEIRKKIRVVQQCMKKN-MNKVEGLYKGGQVICELSEFFDDMGSRLTDAHLVISRAGATSIAEITLARRPAIYIPYPCSKDDHQFYNAEYIKDSGAAVVVEQNSE--VKKNLTKLLVNLLGDSQKLRDMANNTKKIRIKNGVTEFIRIVIHKLG |
| 3TSA Chain:A ((2-386)) | MRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAGLTTAGI------LRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCAL--IGRVLGGLLDLPVVLHRWGVDPTAGPFSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQASDAPQGAPVQYVPYNGSGAFPAWGAARTSARRVCICMGRMVLNATGPA-PLLRAVAAATEL--PGVEA-VIAVPPEHRALLT----DLPDNARIAESVP-LNLFLRTCELVICAGGSGTAFTATRLGIPQLVLPQY----FDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITAMPHPAALVRTLENT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200446 for 2748 contacts (-72.9/contact) +
2D Compatibility (PS) -33376 + (NN) -6338 + (LL) 336
1D Compatibility (HY) -4000 + (ID) 1950
Total energy: -245774.0 ( -89.44 by residue)
QMean score : 0.474
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