Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKEDIINKLKQACSSQDVEITKSDLSKIFDALMKIIKGKLDEEGEIRLHGIGTFSTAISQEKQCRNPQNGEIMTVPQKTRVKFKASQTLLSILNKEKEEVIS
2IIF Chain:A ((62-133))
--------------------LSKRDAKELVELFFEEIRRALENGEQVELSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENAGGGERI
General information:
TITO was launched using:
RESULT:
Template:
2IIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2765 for 353 contacts (-7.8/contact) +
2D Compatibility (PS) -7707 + (NN) -1725 + (LL) 1508
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -15589.0 ( -44.16 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_2IIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IIF-query.scw
PDB file :
Tito_Scwrl_2IIF.pdb
: