Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEVNILDKKWYSIVEDPKGFTLNIINASLKELKIDQYKPNISIALADDNLLHQLNLRFRQMNKPTNVLSFPCEQLSSECDLGDIAISIDTVRKESDEYHIPIPAHVAHMLVHGLLHLLGYDHQKKGEEVVMKNLEGKILASLGYNMCAI
1LML Chain:A ((137-177))
-----------------------------------------------------------------------------GHPAVGVINIPAANIASR-------YDQLVTRVVTHEMAHALGFSGPFFEDARIVANVPNVRGKNFDVPVINS
General information:
TITO was launched using:
RESULT:
Template:
1LML.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11718 for 169 contacts (-69.3/contact) +
2D Compatibility (PS) -4341 + (NN) -3937 + (LL) 5756
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -17040.0 ( -100.83 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_1LML.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LML-query.scw
PDB file :
Tito_Scwrl_1LML.pdb
: