Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNIIHPNLEKSINNWFETQFNSLTLPFYNSIDLRNSGYKIAPIDANLFPAGFNNLSEMSKATTAELMRSYFEGKQHKRVLIIPENYTRNKMYIENVFAIEVILQQAGFETRIGLFHNEAYNLIEPYETIVKENSLLKTTSGFMPDVIILNRDMTSHIPDMLENVKQEIIPSPLYGWHSRQKFKYFKIYKKLVSEFCSEFKIDPWLISAFTEGCDEVDFNDDSPLETVATKVDQVLSLVQKKYEEYGIKTQPYVFIKASNGTYGMGIITATSGEEILTLNKKKRHKMKKIKEGIEVNSVIIQEGVPTIDIFECSPAEPLIYYIGNTPTCYLYRCNSRKDIYSSLNSTNCKFYDVSQVVENKTLSLWGTVSKLAVLALAVEMRSFHI |
| 2DZD Chain:A ((159-210)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P-IIIKAALGGGGRGMRIVRSKSEVKEAFERAKSEA---KAAFGSDEVYVEKLIENPKHIEVQILGDYEGNIVHLYERDCSVQRRHQKVVEVAPSVSLSDELRQRICEAAVQLMRSVGYVNAGTVEFLVSGDEFY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DZD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1993 for 316 contacts (-6.3/contact) +
2D Compatibility (PS) -6072 + (NN) -7568 + (LL) 18100
1D Compatibility (HY) -1200 + (ID) 550
Total energy: 717.0 ( 2.27 by residue)
QMean score : 0.437
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