Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFYNFIMGFQN-DNTPFGILAEHVSEDKAFPRLEERHQVIRAYVMSNYTDHQLIETTNRAISLYMAN
1S8N Chain:A ((173-200))
--AFKWIQRAAMDRRTTMKRVAEVVLETLG--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1S8N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8149 for 125 contacts (-65.2/contact) +
2D Compatibility (PS) -2840 + (NN) -1525 + (LL) 3724
1D Compatibility (HY) -800 + (ID) 300
Total energy: -9890.0 ( -79.12 by residue)
QMean score : 0.263
(partial model without unconserved sides chains):
PDB file :
Tito_1S8N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S8N-query.scw
PDB file :
Tito_Scwrl_1S8N.pdb
: