Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAYDAYMKEIAQQMRGELTQNGFTSLETSEAVSEYMNQVNADDTTFVVINSTCGCAA-GLARPAAVAVATQNEHRPTNTVTVFAGQDKEATATMREFIQQAPSSPSYALFKGQDLVYFMPREFIEGRDINDIAMDLKDAFDENCK
1EP7 Chain:A ((4-109))
-----------------------VIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSND--Y-AGK--VIFLKVDVDAVAAVAEAAG-ITAMPTFHVYKDGVKAD-----DLVGASQDKLKALVAKH------
General information:
TITO was launched using:
RESULT:
Template:
1EP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48051 for 754 contacts (-63.7/contact) +
2D Compatibility (PS) -11768 + (NN) -7815 + (LL) 2916
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -67768.0 ( -89.88 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_1EP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EP7-query.scw
PDB file :
Tito_Scwrl_1EP7.pdb
: