Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMSRLNSVVIKLWLTIILIVTTVLILLSIALITFMQYYFTQETENAIREDARRISSLVEQSHNKEEAIKYSQTLIENPGGLMIINNKHRQSTASLSNIKKQMLNEVVNNDHFDDVFDKGKSVTRNVTIKEKGSSQTYILLGYPTKAQKNSHSKYSGVFIYKDLKSIEDTNNAITIITIITAVIFLTITTVFAFFLSSRITKPLRRLRDQATRVSEGDYSYKPSVTTKDEIGQLSQAFNQMSTEIEEHVDALSTSKNIRDSLINSMVEGVLGINESRQIILSNKMANDIMDNIDEDAKAFLLRQIED----------TFKSKQTEMRDL-EMNARFFVVTTSYIDKIEQGGKSGVVVTVRDMTNEHNLDQMKK---------DFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAVVLDESKRLNRLVNELLNVAR---MDAEGLSVNKEVQPIAALLD----KMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDRMDQVLTNLIDNASRYTKPGDEIAITCDENESEDILYIKDTGTGIAPEHLQQVFDRFYKVDAARTRGKQGTGLGLFICKMIIE-EHGGSIDVKSELGKGTTFIIKLPK-PE |
| 3A0R Chain:A ((9-347)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSESILESLETAIITLSKDGRITEWNKKAEQLFGLKKENVLGRRLKDLPDFEEIGSVAESVFENKEPVFLNFYKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKRRERLSILGEMTARVAHEIRNPITIIGGFIMRMKKHL-DDPETLKKYINIITNELSRLETIVKEILEYSKERVLEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRV----------EADRTRIKQVLINLVQNAIEATGENGKIKITSEDMYTKVRVSVWNSGPPIPEELKEKIFSPFF------TT------LGLSICRKIIEDEHGGKIWTENR-ENGVVFIFEIPKTPE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3A0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -76646 for 2032 contacts (-37.7/contact) +
2D Compatibility (PS) -31383 + (NN) -10201 + (LL) 21476
1D Compatibility (HY) -22800 + (ID) 4100
Total energy: -123654.0 ( -60.85 by residue)
QMean score : 0.329
|
|
|