Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSKKFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKKQVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGL-QFAN--SVTSGIISASERTIDAETTGGNTKVSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVE-GIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIPEEEREQLHTDREDGIYVAKADSD-----IDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQKEQPKRQSRSERQSPGQGDRDFFR |
| 3PV3 Chain:A ((78-342)) | ---------------------------------------------------------------------------------------------------------------------------IGSGVI--IDPNNGVIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKID-AKNLKSLVIGDSDKLEVGDFVVAIGNPFGLN----SQSATFGIVSALKRS-D------E---NFIQTDAAINPGNAGGALVNAKGELIGINTAILS-----VGIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLT--PELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTI-SLLRVGSTVKIIVERDNK----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PV3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78772 for 1861 contacts (-42.3/contact) +
2D Compatibility (PS) -26295 + (NN) -9477 + (LL) 9592
1D Compatibility (HY) -19600 + (ID) 5400
Total energy: -129952.0 ( -69.83 by residue)
QMean score : 0.527
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