Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSDLEKPTIIYPCVWDYRVIMTTNDTSVLKELLETYQRPFKLELKNTSKNAKFYSFNVSMEVSNEAERNEIFQKISQLEVVAHAL
2KO1 Chain:A ((6-74))
---------------AGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVKNTDKLTTLMDKLRKVQGVFTVE
General information:
TITO was launched using:
RESULT:
Template:
2KO1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14160 for 432 contacts (-32.8/contact) +
2D Compatibility (PS) -7386 + (NN) -2068 + (LL) 828
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -25086.0 ( -58.07 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_2KO1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KO1-query.scw
PDB file :
Tito_Scwrl_2KO1.pdb
: