Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLIKVSGDKKVIEVSIPLTSISGKARVKIRHAFSDYGISTATRKIPFSLKHYVEWQIGYDVPIKDKEKFELTTLKDEKYHFLGANNKVKTLYELSEMIYYAKRLGLISLENLENTLKFLEKQKQFIEDNFMITRERFRSHQFGGMDFELSRISYPLLIHSFDDNELSEIVIKEQQYGSKTQAMLYFCFSILELKTATPLLNRTAMPKEHALLIIHETNALVFLEMLKIFGLLSQVHHNDVLKILEKILQN |
1Y07 Chain:A ((67-87)) | ------------------------------------------SVAHPMTPEHYIAWVCLKTRKGIQLKELPVDGAPEVTFALTADDQVLEAYEFCNLHGVWSGK--------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2160 for 50 contacts (-43.2/contact) +
2D Compatibility (PS) -2069 + (NN) -427 + (LL) 14872
1D Compatibility (HY) -400 + (ID) 200
Total energy: 9616.0 ( 192.32 by residue)
QMean score : 0.062
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