Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDDKLPVVHSIKTIN-DVSSVGFEWSKVAD-TYDIDGFVLYRLKKD-SKLKRIAT-IKNPYATHYYDEGLETESSYTYQLATYKGDKIS---KLSEPILVKT--SFIN-PVESVFAS----LEYPKSVKVFWSPHP----NPSVSKYIIQRQNKDGKFLNVGAVKNRLFVEFFDKDLEDGQKYRYQIIAENFMGDKSRPSVIVEGKT--KDLPKEIANVRVSQNLTRQIELSWDKSPEEDVIAYRIYASNNRND-----KYKFIAQTTNTSYVDKIEKDNLTRYYKVVAVDKTHLEGALPKEPAMGETSDRPEAPIITKGT-IQDSSALIQWENNPS----PKIATYAVYRFEANSKTPLRFGNITQNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER |
| 3L5H Chain:A ((198-589)) | -------------------------------------------KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNY-T---VNATKLTV-NL-TNDRYLATLTVRNLVGK-SDAAV-LTIPACDFQATHPVMDLKAFP-KDNMLWVEWTTPR-ESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPE-SIKAYL-KQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG--GKDGPEFTFTTPK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36921 for 2516 contacts (-14.7/contact) +
2D Compatibility (PS) -38625 + (NN) -4683 + (LL) 4152
1D Compatibility (HY) -6000 + (ID) 2300
Total energy: -84377.0 ( -33.54 by residue)
QMean score : 0.320
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