Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNEEMQVLLLMINNKKGNLRPSHKEFLQECLIEAVLHNKNINKTTEYAIRNNIAHLPINKTEGFLVRTYNHSLGIFNENIAEKLKIPKKEKEILQPLNANEKQVLNTALENNEIDARTFKPWDLGSKEASKENASMSEELTQNNSKLSHFNENSIAQNSVGQNNVKEPNTKSNNSKQNHSLSNSDLTSNTDYNKLVADMFENQMDANGNYIGKKFSTQAYDNKTPYKVATGNASEYSSYLYSKKTKSKDIGMER |
1YS7 Chain:A ((160-176)) | LTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFADTNVVDVFIGYLRRKLEAGPRLLHTVRGVGFVLRMQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YS7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2425 for 62 contacts (-39.1/contact) +
2D Compatibility (PS) -1938 + (NN) -3214 + (LL) 9964
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 587.0 ( 9.47 by residue)
QMean score : 0.583
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