Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGSLAIVLGSLLASGTFYTALADGMPMKQQHNNMGESVELHFHYPIKGKQEPKNNHLVVLIDPKIEANKVIPENYQKEFEKSLFLQLSNFLERKGYSVSQFKDVSEIPQDIKEKALLVLRMDGNVAILEDIVEESDALSEEKVIDMSSGYLNLNFVEPKSEDIIHSFGIDVSKIKAVIERVELRRTNSGGFVPKTFVHRIKETDHDRAIKKIMNQAYHKVMAHITKELSKKHMERYEKVSSEMKKRK |
| 3D8U Chain:A ((71-107)) | ---------------------------------------------------------YSIALIIPSLF----------EKACAHFLPSFQQALNKAGYQLLLGY------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3602 for 182 contacts (-19.8/contact) +
2D Compatibility (PS) -3901 + (NN) -899 + (LL) 15204
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 4902.0 ( 26.93 by residue)
QMean score : 0.349
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