Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVSSINQFDSNLYGLLNAKSAPKEDLAPIEGAEKIEREKKDAPTENLPFNPDKRETYGFLVLELMSDREYEAFLRATAGMDESQKRLAA--QSLYSLTDFYNGKFSKEVENAPKQPVNGLHKKAFQTFNATNHNAFLQRYQNAYNNPSSMDVVL |
2LNH Chain:A ((24-62)) | -------------------------------------------------------------------DPELKNLFDM-CGISEAQLKDRETSKVIYDFIEKTGGVEAVKN--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -431 for 174 contacts (-2.5/contact) +
2D Compatibility (PS) -4092 + (NN) -3330 + (LL) 6012
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -3391.0 ( -19.49 by residue)
QMean score : 0.437
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