Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSAYIIETLIKILILVAVFSALGGFATYIERKVLAYFQRRLGPCYVGPFGLLQVAADGIKLFTKEDIIPQGANKFIFTLAPIIAMVSAFVSMAPIPFFPNFTLFGYEIKPLISDINIGFLFF-LAVGSAGIYAPILAGLASNNKYSLIGSARATIQLLSFEVVSTLTILAPLMVVGSLSLVEINHYQSGGFLDWLVFKQPLAFVLFLIASYAELNRTPFDLLEHEAEIVAGYCTEYSGLKWGMFFLAEYAHLFAFSFVISIVFFGGFNAWGFIPGGIAILIKAGFFVFLSMWVRATYPHVRPDQLMNMCWKIMLPLALLNIVLTGIVILI |
1R7L Chain:A ((-6-96)) | -----------------------------------------------------------------------------------------------------AMKPRDINKLIASKIFGYEIKDDNIIKDGRYRLGIPLYSQN-----IESAWQVVEKLEYDVKVTKTDLKPK--------YQVHVFVPGGVKMVFAETAPMAICKGALASV----------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R7L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49623 for 625 contacts (-79.4/contact) +
2D Compatibility (PS) -9670 + (NN) 4403 + (LL) 20456
1D Compatibility (HY) 1200 + (ID) 700
Total energy: -33934.0 ( -54.29 by residue)
QMean score : -0.153
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