Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFFLLKKFSEFLNTQTHFNLKRLNASSFLLETFSKEKHAFVVDLSAPYIGLSKKPPESVLKNTLALDFCLNKFTKNAKILQANVIDNDRILEIKGAKDLAYKSETFILRLEMIPKKANLMILDQEKCVIEAFRFNDRVAKNDILGALPPNIYEHQEEDLDFKGLLDILEKDFLSYQHKELEHKKNQIIKRLNAQKERLKEKLEKLEDPKTLQLEAKELQTQASLLLTYQHLINRRENRVILKDFEDKECMIEIDKSMPLNAFINKKFTLSKKKKQKSQFLYLEEENLKEKIAFKENQINYVRDAAEESVLEMFMPVKNSKIKRPMNGYEVLYYKDFKIGLGKNQKENIKLLQDARANDLWMHVRDIPGSHLIVFCQKNTPKDEVIMELAKMLIKMQKDAFNGYEIDYTQRKFVKIIKGAHVIYSKYRTISLKDT |
3SJB Chain:C ((43-74)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSENKAFQAH------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SJB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8851 for 127 contacts (69.7/contact) +
2D Compatibility (PS) -3442 + (NN) -2389 + (LL) 31796
1D Compatibility (HY) 1200 + (ID) 400
Total energy: 35616.0 ( 280.44 by residue)
QMean score : 0.336
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