Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNKNIDPCFNPEQFLETQKYKGVVTALIFLLLFFIFLMVAFKKAFFAQANMPTLVMIKQDTATRGTIYSQDNYSLATSQTLFKLGFDTRFLNPNKEDFFIDFLSIYSNIPKESLKDALNTKGYTILAYNLTPNMAANIRDLNKKFLAFGVFQNFKDAHDKVWQKQGLNIEVSGVSRHYPYQNSLEPIIGYVQKQEEDKLTLTTGKKGVEKSQNNLLEAQQNGIRSGKRDVSFNFIQNHSYTEVERLDGYEVYLSVPLKLQREIETLLDKTKDKLRAKEILVGIINPKSGEILSLASSNRFD----PNAIKTSDYENLNLSVAEKVFEPGSTIKPIVYSLLLDKNLINPKERIDLNH---GYYQLGKYTIKD------DFIPSKKAVVEDVLIQSSNVGMIKISKSLNPEDFYNGLLGYGFSQKTGIDLSLEATGKIPPLSAFKREVLKGSVSYGYGLNA-------TFLQLLRAYAVFSNEGKLTTPYLVQRETAPNGDIY-IPSPKPTFQVISPKSARKMKETLIKVVRYGTGKNAQFEGLYIGGKTGTARVAKNGSYSAESYNSSFFGFAEDERQVFTIGVVILGSHGKEEYYASKIAAPIFKEITEILVRYNYLSPSIAIQNALEKNRLK |
| 4R3J Chain:A ((80-475)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RNYPHDGMASHTVGYISTQY--------GTAGIESSMNETLTG----------------------------TGSSVVLTINSQMQAVAEAALQGYSGSIV-------VMDPSTGAVLAKASSPSYTHAELGTIIESGTGSQLVDRTTQALYSPGSSFKTVTLAAGIDTH----KTTLDTTYSAPGTMEIGGGTIHNYANEDMGTIPLREA-----FARSSNTALAQLGVALGADNLVSYARAFGYGTALGQDFSTTPSLMPNPAEMTTWELAWASCGLPVGEHASPAGPQTTVMQNAVIAAAIANGGVVMNPYIVDRVLSPEGAVVSTTSPKSLGQAVSADTAAQVREAMLGVVESGTGMGARVPGVKIAGKTGTAD---NG-----NFNSFFIGFAPYDHPTLVVSVVIEGNGENVLGYGAQVGGRVLAQCLNIQALGAAS---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R3J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67101 for 3234 contacts (-20.7/contact) +
2D Compatibility (PS) -37265 + (NN) -14413 + (LL) 18252
1D Compatibility (HY) -13600 + (ID) 4950
Total energy: -119077.0 ( -36.82 by residue)
QMean score : 0.392
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