Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTLKGKYNEAKVFTDN-----VD---DNTIGQIITLCNQPFAKDSKIRIMPDTHGGKGCVIGTTMTIQ----DKIVPNLVGVDIGCGLYVVKLKPGKLK--MDFDKLDKVIRERVPSGSKTHDK-P-VDE--FDLE----------------------------GI-----VAPIHHGWVARSIGTLGGGNHFIEVNQGS---------------DGIYLVIHSGSRVLGKEIAEYHQEVAYKRLDILRKELKLDATAAKKRGNLEMANNLNGEREQVKLDYDLSYVTGV--DLKNYLNDMEIAQKFAARNRYVMAQIILKAMKWD-K-----AVVSAFDCVHNYIDIEH----N--MLRKGATSAQ-------------LGEQIIVPLNMREGSILATGKGNA--DWNYSAPHGAGRMLSRSKAKAQISLESYQAAMK--DVWTT-SVSKKTIDEAPKAYKSAKQLLADVE--DTMEIQEIIKPLYNFKA |
| 2EPG Chain:A ((18-476)) | -----KMRVDAVFFASKEILKDLEAENYASLQQLMNVATLPGIVEP-ALAMPDIHWGYGFPIGGVAAFDPEEGGVVSPGGVGFDINCGVRLLASHLTLEDLLPRQKELADALYRLVPS------RDVRFSKRELKEILKEGAGWLVKRGYGYPEDVRFIESQGRLPWANPDKVSERAFERGAPQIGTLGSGNHFLEVQYVDEVYDEEAALAFGLFKGQVTVLIHTGSRGLGHQVCQDYVERFLKVAPRYG---------------------------IELVDKQLAAAPIKSPEGQDYLQAMAAAANFAFANRQLIAHFVREAFEKVGFTPRDHGLRVLYDLAHNNAKFEEHRGRRVLVHRKGATRAFGPGHPEVPEEYRRVGQPVLVPGDMGRYSYVLAGTEKAMEVSFGSSCHGAG--------------RNLVKELAERGILVRAA---------------VSLVVEAVEGAGIGKKVARLRPLIVVKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11953 for 2572 contacts (4.6/contact) +
2D Compatibility (PS) -32744 + (NN) -17 + (LL) 4628
1D Compatibility (HY) 18400 + (ID) 900
Total energy: 1320.0 ( 0.51 by residue)
QMean score : 0.152
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