Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQQKKIQILKDLVNIDSTNGHEEQVANYLQKLLAEHGIESEKVQYDLDRASLVSEIGSSNEKVLAFSGHMDVVDAGDVSKWKFPPFEATEHEGKLYGRGATDMKSGLAAMVIAMIELHEEKQKLNGKIRLLATVGEEIGELGAEQLTQKGYADD-------LDGLIIGEPSGHRIVYAHKGSINYTVKSTGKNAHSSMPEFGVNAIDNLLLFYNEVEKFVKS---IDATNEILGDFIHNVTVIDGGNQVNSIPEKAQLQGNIRSIPEMD-NETVKQVLVKIINKLNKQENVNLELIFDYDKQPVFSDKNSDLVHIAKSVASDIVKEEIPLLGISGTTDAAEFTKAKKEFPVIIFGPGNET-PHQVNENVSIGNYLEMVDVYKRIATEFLS |
| 3TX8 Chain:A ((16-369)) | ------IVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRGLASRVMLA--GHIDTVPIAD----NLP---SRVEDGIMYGCGTVDMKSGLAVYLHTFATLATSTE-LKHDLTLIAYECEEV----ADHLNGLGHIRDEHPEWLAADLALLGEPTGGWIEAGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVNIDGLTYREG---LNIVFCESGVANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETL--ELDGQDGIEWA-VEDGAGGALPGLGQQVTSGLIDAVGREKIRAKF------GWTDVSRFSAMG--IPALNFGAGDPSFAHKRDEQCPVEQITDVAAILKQYLSE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36512 for 2953 contacts (-12.4/contact) +
2D Compatibility (PS) -35809 + (NN) -13123 + (LL) 2308
1D Compatibility (HY) -13600 + (ID) 4500
Total energy: -101236.0 ( -34.28 by residue)
QMean score : 0.416
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