Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VIYYICALYTFISALVSFGFSLDALLKSRKVNGDALINAKYAVSRSLSLLIVALGLFIFKSDAFLVALSLVMIGAQLFDGIIGIKISTFKTVGPLLTAVGNVIMLILFLTI |
1RKC Chain:B ((1944-1969)) | ------------------------------YTKKELIESARKVSEKVSHVLAALQA------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2196 for 97 contacts (-22.6/contact) +
2D Compatibility (PS) -2803 + (NN) -889 + (LL) 8324
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 486.0 ( 5.01 by residue)
QMean score : 0.080
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