Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHRLLGRVMLLLGALGVILTMSFSYVAAAEKPNIDKPVKGLEQTEKAIVADDYNKAKDAFQEDKLWWSENKQVVKEKSYDLAGQID---------------RQIAEISLGILNN-DKQQAMDGITSLHNLLKTYQDGTYTDNEGNTNITLSSYIAKLTA--------TKKLVDEKEWAKAATQIQDLKTEWLAVEGDVVSQSQAAYDNTERDLMLLDAYINDPAKQAKTADVLDGMTEELKPFADVTYTWFDAALIPFREGLEALLIIATLLTYTKRTKTRTAKRWIIGGTAAGLVVSLALGMIVAFWLSALAFGDNNNLINGWAGLIASIMMLYVSYWLHRNSDITRWNNYMEGKSNQALSNGKMISFAFLAFLAILREGLETVVFLIGMVGRMSNFELLMGILAGLGVLLIIAFVMLRYSVHIPVKPFFMISSAIVFYLCFKFMGSGIHSLQLAGVIPTSVEDYLPSIPALSIYPSWYSFLPQVLLVIFGLTILIKQQIKKKS |
| 3WSC Chain:A ((41-231)) | -----------------------------YVSENLQTLVRDTREFTNAVKAGDVAKAKKLFASTRMSYERIEPIAELFS-DLDASIDSRADDHEKAEKDPAFFGFHRIEYGLFAQNSAKGLAPVADKLMADVLELQKRIRGLT-FPPEKVVGGAAVLMEEVAATKISGEEDRYSHTDLWDFQANFEGAKKIVDLFRPLVVKDNRAFADKVDANFDTVFKTLA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WSC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 41530 for 1252 contacts (33.2/contact) +
2D Compatibility (PS) -17598 + (NN) -2226 + (LL) 27256
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: 43012.0 ( 34.35 by residue)
QMean score : 0.274
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