Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKLTYVIITGLVLVFIAGAFWITNSTNQSDQKATQTEPIKKISPANVKTISSEAKKTLNSLASSGADKASISDLKQLIKELKSYPTEKNDSGVYLQNLTACLEAVKSYTTGKADEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKGVVTLTMVGDNSFGTYPETPEHLKFDNVFQKNNGNNTYVYKNCLPWFKSDDYTIINAESAFTNATKAENKMWRIKSDPAHVAFLPASGVDAANLANNHTMDYF-QVGYDD--TLKAFKENNIPVFN--ADAPLETTIKGMKTVLLGYDCRMSQQ-SPAYLERIVKDVKKYKKEDTLVIVNMHWGVEYRETPTDYQTQFGHAILDAGADIIMGSHPHRLESVEKYK--DKYIVYSMGDFAFGADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAKKIVDELNRISKPIEGGVTEYTYFDPF |
| 1T70 Chain:A ((1-195)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------MRVLFIGDVFGQPGRRV----------------LQNHLPTIR---PQFDFVIVNMENSAGGFG----------MHRDAARGALEAGAGCLTLG-NHAWHHKDIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD--DLGTVFVDFHAEATSE------KEAMGW-HLAGRVAAVIGTHTHVPTADTRILKGGTAYQTDAG----------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50515 for 1544 contacts (-32.7/contact) +
2D Compatibility (PS) -19641 + (NN) -2692 + (LL) 17376
1D Compatibility (HY) -400 + (ID) 1200
Total energy: -57072.0 ( -36.96 by residue)
QMean score : 0.235
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