Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLRQVTLKNTHQTSGIDKWISWLKKDISVRNRHKSKKLSLKKQRKVVQLFNNLFASGFSLTDMVTFLKRSKLLSDYYTDRMNKALLEGKDLSKMLGELGF----SDTVITQVALADLHGNISRSLLKIESYLANLLLVRKKVIEVATYPLILLTFLVLIMIGLRHYLMPQLGENNFATSLITNVPNIFLL---LLAVVLIFSLIFYIVQKRLSRIKVACFLTTIPLVGSYVKLYLTAYYAREWGNLLSQGVELDQIVKVMQNQKSKL----FREIGYDMEEGFLSGKAFHQKVLDYPFFLTELSLMIEYGQVKAKLGTELDIYADEKWEDFFTKLARATQLIQPVIFIFVALIIVMIYAAMLLPMYQNMEILS |
| 3W6S Chain:A ((19-243)) | ------------------------------------------------------------------------SIEWKLTANLRNGPTFFQPLADSIEPLQFKLIGSDTVATAFPVFD-TKYIPDSLINYLFKLFNLEIESGK-----TYP----QLHSLTKQGFLNYWF-----HSFAVVVLQTDEKFIQDNQDWNSVLLGTFYIKPNYAPRCSHNCNAGFLVNGAHRGQKVGYRLAQVYLNWAPLLGYKYSIFNLVFVTNQASWKIWDKLNFQRIGLVPHAGILNGFSEPVDAIIYGKDLTKIEPEFLSME-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W6S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121977 for 1625 contacts (-75.1/contact) +
2D Compatibility (PS) -22083 + (NN) 4867 + (LL) 14528
1D Compatibility (HY) -6000 + (ID) 2400
Total energy: -133065.0 ( -81.89 by residue)
QMean score : 0.227
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