Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVIIVRKKIRAYILLESLVGLAILVTITSLVISEINRQQSHIARRQHEQEVLILARMAVQTDQKILEANGVNIRIEESKNKIVLFEGNKEILHVSKVKG
1W8X Chain:P ((1-116))
----MDKKKLLYWVGGGLVLILIWLWFRNRPAAQVASNWEGPPYMTYNQP----------------QAGSVTLPVADSITSQLNDYASSLNDYLASQAG
General information:
TITO was launched using:
RESULT:
Template:
1W8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6200 for 318 contacts (19.5/contact) +
2D Compatibility (PS) -7793 + (NN) -716 + (LL) 3004
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -1855.0 ( -5.83 by residue)
QMean score : 0.048
(partial model without unconserved sides chains):
PDB file :
Tito_1W8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W8X-query.scw
PDB file :
Tito_Scwrl_1W8X.pdb
: