Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDVRLINGIALAFEGDAVYSLYIRRHLIMQ-GFTKPNQLHRKATQYVSANAQALLINAMLEENILTDEEQLIYKRGRNANSHTKAKNADIITYRMSTGFEALMGYLDMTGQIKRLETLIQWCIETIEK
1O0W Chain:A ((48-154))
------ESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGK--------FLFLGKGEEKT----GGRDRDSILADAFEALLAAIYLDQGYEKIKELFEQEFEFYIE
General information:
TITO was launched using:
RESULT:
Template:
1O0W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32302 for 713 contacts (-45.3/contact) +
2D Compatibility (PS) -11277 + (NN) -1672 + (LL) 1988
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -49063.0 ( -68.81 by residue)
QMean score : 0.240
(partial model without unconserved sides chains):
PDB file :
Tito_1O0W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O0W-query.scw
PDB file :
Tito_Scwrl_1O0W.pdb
: