Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRHFETTRRIVIKVGTSSLVQTSGKINLSKIDHLAFVISSLMNRGMEVILVSSGAMGFGLDILKMDKRPQEISQQQAVSSVGQVAMMSLYSQIFSHYQTHVSQILLTRDVVVFPESLQNVTNS------------FESLLSMGILPIVNENDAVSVDEMDHKTKFG--DNDRLSAVVAKITKADLLIMLSDIDGLFDKNPNIYDDAVLRSHVSEITDDIIKSAGGAGSKFGTGGMLSKIKSAQMVFDNNGQMILMNGANPRDILKVLDGHNIGTYFAQGK |
3LL9 Chain:A ((5-265)) | ----------IILKLGGSVITRKDSEEPAIDRDNLERIASEIGNASPSSLMIVHGAGSFGHPFAGEYRIGSEIENEEDLRR--RRFGFALTQNWVKKLNSHVCDALLAEGIPAVSMQPSAFIRAHAGRISHADISLIRSYLEEGMVPVVYGD---VVLDSDRRLKFSVISGDQLINHFSLRLMPERVILGTDVDGVYTRNPKKHPDARLLDVIG---------------------MVGKIRELLLLAEKGVESEIINAAVPGNIERALLGEEVRGTRI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LL9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136015 for 1871 contacts (-72.7/contact) +
2D Compatibility (PS) -24576 + (NN) -12730 + (LL) 1376
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -181945.0 ( -97.24 by residue)
QMean score : 0.312
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