Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MFLSIMAGVIAFVLTVIAIPRFIKFYQLKKIGGQQMHEDVKQ----HLAKAGTPTMG---GTVFLIV--ALLVSLIFSI-ILSKENSGNLGATFGIL-----SVVLIYGIIGFL-DDFLKIFKQINEG----------LTPKQKMSLQLIAGLIFYFVHVLPSGTSAINIFGFYLEVGYLYAFFVLF-WVVGFSNAVNLTDGIDGLASISVVISLITYGIIAYNQTQFDILLIIVIMIGALLGFFV-----FNHKPAKVFMGDVGS-------------------LALGAMLAAISIALRQEWTLLFI--GFVYVFETSSVMLQVAYFKYTKKKTGVGKRI--FRMTPFHHHLELGGVSGKGN------KWSEWKVDAFLWAIGIFMSA-ITLAILYL- |
| 5A07 Chain:A ((40-434)) | DHDAEVLDSIMDRLHEPLYEKDTFDPNEVLAENKQLYEEFLLQEISEPKVDNLVRSGDPLAGKAKGTILSLVRNSDLEDIISSIQQLEEEYNKNFGYPYTFLNDEEFTDEFKDGIKSILPKDRVVEFGTIGPDNWNMPDSIDRERYDQEMDKMSKENIQYAEV------ESYHNMCRFYSKEFYHHPLLSKYKYVWRLEPNVNFYCKINYDVFQFMNKNDKIYGFVL---NLYDSPQTIETLWTSTMDFVEEHPNYLNVNGAFAWLKDNSQNPKNYDYTQGYSTCHFWTNFEIVDLDFLRSEPYEKYMQYLEEKGGFYYERWGDAPVRSLALALFADKSSIHWFRDIGYHHTPYTNCPTCPADSDRCNGNCVPGKFTPWSDLDNQNCQATWIRHSMSEEELEMY |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281034 for 2418 contacts (-116.2/contact) +
2D Compatibility (PS) -32817 + (NN) 6896 + (LL) 204
1D Compatibility (HY) -5600 + (ID) 3050
Total energy: -315401.0 ( -130.44 by residue)
QMean score : 0.211
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