Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKKIILSIATIAATASLAVSVQASEKVELKVATDSDTAPFTY-QKDGKFKGYDVDVVKAVFKGSKYKVTFKTVPFDTISTGIDAGKFDLSANDFSYNKERAEKYLFSDPISRSNYAVVGKKGSHYKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIKIKYVSGTTGVTSRLKNIESGKIDFILYDAISSDYIVKDQSLN--LSVSPLKGKIGNNKDGLEYLLLPKDKKGKTLQKFINKRIKVLKENGTLARLSKQYFGGDYVSNIDK
3VVE Chain:A ((37-256))----------------------------EIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKPRWIAQSFDTLLIQLNQGRFDFVIASHGITEERARAVDFTNPHYCTGGVIVSRKGGP-RTAKDLQGKVVGVQVGTTYMEAAQ--------KIP-GIKEVRTYQRDPDALQDLLAGRIDTWITDRFVAKEAIKERKLENTLQVGELVFQ--------ERVAMAVAKGNKSLLDALNRALAELMQDGTYARISQKWFGEDVRCK---


General information:
TITO was launched using:
RESULT:

Template: 3VVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44594 for 1808 contacts (-24.7/contact) +
2D Compatibility (PS) -23892 + (NN) -10219 + (LL) 3576
1D Compatibility (HY) -9600 + (ID) 3000
Total energy: -87729.0 ( -48.52 by residue)
QMean score : 0.398

(partial model without unconserved sides chains):
PDB file : Tito_3VVE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VVE-query.scw
PDB file : Tito_Scwrl_3VVE.pdb: