Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQASTTDYSGVYKGYYIDFEAKETRQKTAMPMKNFHAHQIEHMANVLQQKGICFVLLHFSTLKETYLLPANELISFYQ---I---DKGNKS-----MPIDYIRKNGFFVKESAFPQVPYLDIIEEKLLGGDYN |
| 3PVI Chain:A ((65-156)) | ---------------------------------------------------------------------------------------------QEYELKSINIDLTKGFSTHHHMNPVIIAKYRQVPWI-FAIYRGIAIEAIYRLEPKDLEFYYDKWERKWYSDGHKDINNPKIPVKYVMEHGTKIY----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PVI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19235 for 466 contacts (-41.3/contact) +
2D Compatibility (PS) -8123 + (NN) 2535 + (LL) 8048
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -20375.0 ( -43.72 by residue)
QMean score : 0.300
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