Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRLENIISLVSQYQKIDVNTLSELLQVSKVTIRKDLDKLEGKGLLHREHGYAVLNSGDDLNVRLSFNHKTKKEIAALAANMVSDNDTILIESGSTCALLAENICQT-----KRNVTILTNSCFIANYLREYDSCQIVLLGGEYQSSSQVTVGPLLKKMISLFHVSLAFVGTDGFDPKLGFMGRDLMRSEVA-QEMANAADEVIILTDSSKFNQTALVEQLPLSTVSQVITDKHPNSEIANLFQEAEITIQSLLQVP |
1LK5 Chain:A ((3-130)) | -------------------------------------------------------------------VEEMKKIAAKEALKFIEDDMVIGLGTGSTTAYFIKLLGEKLKRGEISDIVGVPTSYQAKLLAIE-HDIPIASLDQV-------------------DAIDVAVDGADEVDPNLNLIK-GRGAALTMEKIIEYRAGTFIVLVDERKLVDYLCQKMPVPIEVIPQAWKAIIEELSIFNAKAELRMGVNKDGPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LK5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81520 for 956 contacts (-85.3/contact) +
2D Compatibility (PS) -13752 + (NN) -10648 + (LL) 6404
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -105166.0 ( -110.01 by residue)
QMean score : 0.513
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