Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MIMEKYTSI-KQSGRHYGLDLLRIISMFMIVITHVLGKGG--LRSSVEGHADSYFIV---TWIIQVLVYGAVNCYALISGYV-GINSRYRYSKLLSIWAQVFFYTFT----ITALFAITGHEVTLLNWRDAFFPIVSGQYWYITAYF---GL-L-VFMPVINNGLNAL-TDKQLKQLVLLMFIIFSILPA-VLNNRVPEFSLSKGFEMTW-LL----ILYIIGA-----YLKRIDLNIFKTSYLLIIYLLSLVATYAMKFSVGDIWYWYVSPTLTLGAV-SLFILFARASI-KPSG-FLKKIIV-VLAPSTLGVYLCHLHPLIVKYFVRDFAETFVY-ES-IYLYPFLILGAGILIYLLAFIVERIRLRIFK---------AIHFSNFLRWFDDKFPY |
| 4HBS Chain:A ((10-415)) | NSEVKMPQIDSEWNLELMPNRSGQYWKVFVYKDLKYNALFTRSLGWNGGDGVFTTGLPDGNIFWSFNDSFYGVINENRSRGNCSFPRNSIMVQTPGEKDENLVWLADYVQTNDPNADRYYQVRTHIRHPKATLSDEKIQAGEIDQDYLYWAGDATIYNNQMQMLWGAVDNTDPNNLMRRFGTCLATYSLEGKPGDATYMKLISRNDNFNDHTLGYGDTMWEDEDGHIYLYTTSNYKVAVARTATRDLGSQWEYYVADPQGHFSWTTQYPSTQDAENSTIIPLESACSMPWVFKKGDTYYMIGQSMWFGRDVLMFRSKHPYGPFVDQKTLFTLPEFLDKIGEQRYQHVYMVNIHPALSRTGELVISTNTDCSNFWDNFNAPGSADFYRPYFYRVFNWESLYDNDAPL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -350674 for 2639 contacts (-132.9/contact) +
2D Compatibility (PS) -36283 + (NN) 15604 + (LL) 0
1D Compatibility (HY) 10400 + (ID) 1600
Total energy: -362553.0 ( -137.38 by residue)
QMean score : 0.076
|
|
|