Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNKIILSTAALTALFLGYNSVTADTYNNYQPHRSNNMDLTEEYNYNNQIELQERIKK-LNIPFKEKLALLRKVKSRQDSYVLDTLRKEVENKNSEYSELEQEYQRISALIDAKFPQGKSSLAEKLHKELIWDLDGVKYDEGISKRTALKKLEGKINEYTKKYSYLF |
2DGJ Chain:A ((201-251)) | -------------------------------------------ENLRNAKTSATNTINGLPNLTQLQKDNLKHQVEQAQNVVGVNGVKDKGNLEH------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2037 for 310 contacts (-6.6/contact) +
2D Compatibility (PS) -5499 + (NN) -5308 + (LL) 7856
1D Compatibility (HY) 1200 + (ID) 400
Total energy: -4188.0 ( -13.51 by residue)
QMean score : 0.607
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