Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVLGKLPDGIFTLLRFN------------DEGGQLTHISESEALWLTLELAPEKMDCI
1EU1 Chain:A ((56-90))
----------KYPMVRREFLEKGVNADRSTRGNGDFVRVTWDEALDLVARELKRVQESY
General information:
TITO was launched using:
RESULT:
Template:
1EU1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2951 for 88 contacts (-33.5/contact) +
2D Compatibility (PS) -2514 + (NN) -945 + (LL) 448
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -7812.0 ( -88.77 by residue)
QMean score : 0.139
(partial model without unconserved sides chains):
PDB file :
Tito_1EU1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EU1-query.scw
PDB file :
Tito_Scwrl_1EU1.pdb
: