Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKEIKIRSIPEKTWAQLHMISEEYEYPSFNEFMLAQLQRIVENGGLDLYDNKFAETLAVIKEQQAQILDQLLKNEIKLLAYHAKQDIVEEL--------TTDWLRFMDDVDALAAERGAGGR
1XTG Chain:A ((260-315))
-------------------------------------------------------EELRTFGGHDAKFIDSLQENEFRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYLLSEDTS
General information:
TITO was launched using:
RESULT:
Template:
1XTG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2396 for 196 contacts (-12.2/contact) +
2D Compatibility (PS) -4946 + (NN) -1602 + (LL) 4568
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -9626.0 ( -49.11 by residue)
QMean score : 0.236
(partial model without unconserved sides chains):
PDB file :
Tito_1XTG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XTG-query.scw
PDB file :
Tito_Scwrl_1XTG.pdb
: