Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDEKYGVPRDIYAKVKIIGLVIADIVFVGGSAVAALSIGTRIFPTNQWPQLVAFMILTPLMCLYLVLP-----TNGGKKNWHSMFLFFRRRRKRYISLNYQRRENR
1G8X Chain:A ((256-286))
----------------------------------------------------------ASIQSYLLEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPES
General information:
TITO was launched using:
RESULT:
Template:
1G8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1774 for 73 contacts (-24.3/contact) +
2D Compatibility (PS) -2864 + (NN) -521 + (LL) 4944
1D Compatibility (HY) -1600 + (ID) 200
Total energy: -2015.0 ( -27.60 by residue)
QMean score : -0.211
(partial model without unconserved sides chains):
PDB file :
Tito_1G8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G8X-query.scw
PDB file :
Tito_Scwrl_1G8X.pdb
: