Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIIFVSLKKFVQTFWWLIAAIALYVFYQSIGLNMFFLLII-----GLLALKFVPALVLPILFIALGVYFSGGFSFMADLIILFFWGLVSLPICFAFAESVRTSIERKR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 2J37 Chain:W ((8-488)) | RKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQA-----CEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAGLQSMMRQFQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J37.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127456 for 633 contacts (-201.4/contact) +
2D Compatibility (PS) -9982 + (NN) 526 + (LL) 824
1D Compatibility (HY) 0 + (ID) 850
Total energy: -136938.0 ( -216.33 by residue)
QMean score : 0.160
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