Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKIKIVTDSSITIEPELIKELDITVVPLSVMIDGTLYSDNDLKAQGEFLNLMRGSKELPKTSQPPVGVFAEIYEKLMNEGAEHIIAIHLTHTLSGTIEASRQGANIAGADVTVIDSTFTDQCQKFQVVEAAKLAKEGADLDTILARVEEVRQKSELFIGVSTLENLVKGGRIGRVTGLLSSLLNIKVIMELTNHELVPIVKGRGLK-TFSKWLDNFVESAQTRKIAEIGISYCGKADMANNFKEKLAV---LGAPISVLETGSIIQTHTGEDAFAVMVRYE |
2DT8 Chain:A ((1-279)) | -MRITLVTDSTSDLPQDLRGRLGVRVVPLYVNLSGAIYRDWEEITPTEIFQKVREGAAFPTTSQPSPEDFARVYREALEE-ADHVLSLHISGKLSGTVQSAELAAQEFPGRVTVVDTQAASLGVGMMVLRAKELLEEGQSLEAVLAELERLRRDHFVRFSVATLEFLKRGGRIGGAQAFLGTLLNLKPVLTLKEGRVEAAGRARGEKKAREEILKAFRAWAEGRKRIRAYFLYSGDEDAVAALRQEVLASGLPVEEALVNELGAVIASHTGPGTYGFYAYSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DT8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160544 for 2425 contacts (-66.2/contact) +
2D Compatibility (PS) -30553 + (NN) -13448 + (LL) 36
1D Compatibility (HY) -14800 + (ID) 4100
Total energy: -223409.0 ( -92.13 by residue)
QMean score : 0.534
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