Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQKSNYF---KGQIDYAVVIPVFFLLMIGLASIYVATMNDYPSNIYIAMFQQVSWIIMGCII---AFVVMLFSTEF--LWKATPYLYALGLTLMVLPLIFYSPQLFAATGAKNWVTIGSVTLFQPSEFMKISYILMLS-------------------RITVSFHQKNRKTFQDDWKLL-----GLFGLVTLPVMIL--------------LMLQKDLGTALVFLAILSGLIL-------------------------------LSGISWWIILPILSTIVLFIAS----FLMIFI----SPNGKEWFYNLGMDTYQINRLSAWIDPFS-----------------FADSIAYQQTQGMVSIGSGGVTGKGFN---------ILELSVPVRESD------------------MIFTV---IAENFG--FIGS-----AIVLGLYLIIIYRMLRITIESNNQFYTFI-STGFIMMIVFHVFENIGAAVGILPLTGIPLPFISQGGSSLL-------------SNLIGIGLVLSMSYQNTVRQAKANGSHLKYRSI------------------- |
| 2J3L Chain:A ((1-565)) | MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYL-PLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFH-ADEASLDQSYRDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEVANFFEVEPQRIIKSVLFIADEEPVMVLVRGDHDVNDVKLKNFLGADFLDEATEEDARRVLGAGFGSIGPVNVSEDVKIYADLAVQDLANAIVGANEDGYHLTNVNPDRDFQPISYEDLR-FVQEGDPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLDENGREKSVIMGCYGIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNVKDEYQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVG-----KKAVDGVVEVKIKRTGEMLEVRKEELESTLSILM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -370709 for 2734 contacts (-135.6/contact) +
2D Compatibility (PS) -41025 + (NN) 6711 + (LL) 660
1D Compatibility (HY) -13600 + (ID) 3150
Total energy: -421113.0 ( -154.03 by residue)
QMean score : 0.112
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