Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNQLKNNYFFAVIRGKSSEDALEIAKHAILGGIRNIEVTFSTPEASKVIKQLSDDFKNNKKIIVGAGTVMTTQLAKDAIDAGAKFLVSPHFDSDIANLANENKVYYFPGCATATEIVVARKYKCQIIKLFP----GGVVGPDFIKDIHGPIPDVDLMPSGGVSVSNVAEWRKAGAV-AVGVGSALSSKVATEG-YDSVTKIAKQFVSALD
4E38 Chain:A ((29-231))--NQLKALKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLR---QAQPEMLIGAGTILNGEQALAAKEAGATFVVSPGFNPNTVRACQEIGIDIVPGVNNPSTVEAALEMGLTTLKFFPAEASGGI---SMVKSLVGPYGDIRLMPTGGITPSNIDNYLAIPQVLACGGTWMVDKKLVTNGEWDEIARLTREIVEQVN


General information:
TITO was launched using:
RESULT:

Template: 4E38.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140944 for 1672 contacts (-84.3/contact) +
2D Compatibility (PS) -21429 + (NN) -10894 + (LL) 244
1D Compatibility (HY) -14800 + (ID) 2900
Total energy: -190723.0 ( -114.07 by residue)
QMean score : 0.652

(partial model without unconserved sides chains):
PDB file : Tito_4E38.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4E38-query.scw
PDB file : Tito_Scwrl_4E38.pdb: