Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNHKTKKLTVLAIMIALDVFLTPIFRIEGMAFMSSVVNIIAGVIMGPIYALVMALVTAFIRILTQAGVASVAPLAILGAGPGAFLAGWLYQFYAKDWMSWVGEFIGTGIIGALLSAPIMVWFWTWTADGNHEVLAKASAAQSIFLFMPRFIGATIIGGVIALLLLQGLKRVPVFMTIQALFKGEKVK |
2O2C Chain:A ((113-138)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------KCALLRLAEERGIRQFVQSVFRGERV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O2C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4831 for 105 contacts (-46.0/contact) +
2D Compatibility (PS) -2910 + (NN) -2483 + (LL) 14772
1D Compatibility (HY) -1200 + (ID) 350
Total energy: 2998.0 ( 28.55 by residue)
QMean score : 0.186
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