Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGSLSEIKDKILSTEKTSKITSAMQMVSSAKLVKSEQAARDFQVYASKIRQITTNLLKSDLVSGSDNPMLASRPVKKTGYIVITSDKGLVGGYNSKILKAMMDTITDYHTENDDYAIISIGSVGSDFFKARGMNVSFELRGLEDQPSFDQVGKIIAQAVEMYKNELFDELYVCYNHHVNSLTSQVRMQQMLPIKELDADEASEDRVITGFELEPNREVILEQLLPQYTE--SLIYGAIIDAKTAEHAAGMTAMQTATDNAKNVINDLTIQYNRARQAAITQEITEIVAGANALE |
1NBM Chain:G ((1-272)) | --ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVY-------------------------------------------LCGAIHSSVAKQMK-------------------------------------------------------------------------------------------------------------------------------LANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NBM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6793 for 700 contacts (9.7/contact) +
2D Compatibility (PS) -12857 + (NN) -1754 + (LL) 11716
1D Compatibility (HY) -10000 + (ID) 2400
Total energy: -8502.0 ( -12.15 by residue)
QMean score : 0.401
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