Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVLVVDDEPVARNELIYLLNKYDSNLVIAEAHDMATALAILLRETFDVALLDIHLRDDSGLQLAEYINKMPK----PPLLIFATAYDQYAIQAFEHDARDYLLKPYDFDRLKQAMDRVKGALSTSTIIESVTSGPLFKQQYPLTVEDRIYLVSADDILLIEAMQGKLIIQTPDKNYEIDGSLQQWQDKLPSSQFVRVHRSYIVNINAIKTIEPWFNQTLQLHLCNKITVPVSRANVKPLKQMLGIST
3TO5 Chain:A ((13-130))
MKILIVDDFSTMRRIVKNLLRDLGFNNT-QEADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFE-------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TO5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95934 for 856 contacts (-112.1/contact) +
2D Compatibility (PS) -12630 + (NN) -8640 + (LL) 9784
1D Compatibility (HY) -6400 + (ID) 1800
Total energy: -115620.0 ( -135.07 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_3TO5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TO5-query.scw
PDB file :
Tito_Scwrl_3TO5.pdb
: