Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLFQEKIAYNCAKKEALYKESLGRYALRS----MLAGAYLTMSTAAGIVAADTIGKISPALSGFVFAFIFSFGLIYVLIFNGELATSNMLYLTAGAYNKNISWKKAITILIYCTFFNLVGA---CILAWLFNQSYSFQHLTNDSFLGHVVAKKLGKPSSGAFLE----GIIANMFVNLAILAYMLLKEESAKMTVILSAIFMFVFLSNEHLIANF--------------ASFMLAAFSHIEHIKGFTLLNVIRQWTL-VFFGNWIGGGVFIGLAYAWLNKTKTSHHE
3Q7K Chain:A ((19-274))
------------AEEAGVYKAT--KHPLKTFYLAITAGVFISIAFVFYITATTGTGAMPYGMAKLIGGICFSLGLILCVICGADLFTSTVLIVVAKASGR-ITWGQLAKNWLNVYFGNLIGALLFVLLMWL-----SGEYMTANGQWGLNVLQTADHKMHHTFIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFATPEFWTAVGSSPESFSHLTVMSFITDNLIPVTIGNIIGGGLLVGLTY------------
General information:
TITO was launched using:
RESULT:
Template:
3Q7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -187921 for 1801 contacts (-104.3/contact) +
2D Compatibility (PS) -23776 + (NN) -8478 + (LL) 2144
1D Compatibility (HY) -22000 + (ID) 3450
Total energy: -243481.0 ( -135.19 by residue)
QMean score : 0.179
(partial model without unconserved sides chains):
PDB file :
Tito_3Q7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q7K-query.scw
PDB file :
Tito_Scwrl_3Q7K.pdb
: