Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLYVQLMVILTFSFAGEVLSTIFNLPVPGSIIGLILLFLALKYKIIRLRHIDAVGNFLLANMTILFLPPAVGLMEHFQDIKPYLFGIA--IIILGALFLNILTIGLVSQWIKKRYEGDYPEIGGKNGNFNE
1IFP Chain:? ((1-44))
-------------------------------------------------------------------------MQSVITDVTGQLTAVQADITTIGGAIIVLAAVVLGIRWIKAQFF---------------
General information:
TITO was launched using:
RESULT:
Template:
1IFP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6854 for 156 contacts (-43.9/contact) +
2D Compatibility (PS) -4053 + (NN) 474 + (LL) 6500
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -7133.0 ( -45.72 by residue)
QMean score : 0.190
(partial model without unconserved sides chains):
PDB file :
Tito_1IFP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IFP-query.scw
PDB file :
Tito_Scwrl_1IFP.pdb
: