Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKFAFAKGIATGVVATAATLAGAAFAIKKTIIEPEEEKIAFIEENRKKAARKRVSH
1UG6 Chain:A ((4-21))
------NAEKFLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEPACDH
General information:
TITO was launched using:
RESULT:
Template:
1UG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -501 for 44 contacts (-11.4/contact) +
2D Compatibility (PS) -1882 + (NN) 741 + (LL) 804
1D Compatibility (HY) -400 + (ID) 250
Total energy: -1488.0 ( -33.82 by residue)
QMean score : -0.394
(partial model without unconserved sides chains):
PDB file :
Tito_1UG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UG6-query.scw
PDB file :
Tito_Scwrl_1UG6.pdb
: