Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIGIIVLTLLTFFLVSCGQQTKQESTKTTISKMPKIEGFTYYGKIPENPKKVINFTYSYTGYLLKLGVNVSSYSLDLE--------KDSPVFGKQLKEAKKLTAD---DTEAIAAQKPDLIMVFDQDPNI-NTLKKIAPTLVIKYGAQNYL----DMMPALGKVFGKEKEANQWVSQWKTKTLAAKKDLHHILKPNTTFTIMDFYDKNIYLYG--NNFGRGGELIYDSLGY-AAPEKVKKDVFKKGWFTVSQEAIGDYVGDYALV---NINKTTKKAASSLKESDVWKNLPAVKKGHIIESNYDVFYFSDPLSLEAQLKSFTKAIKENTN |
| 2CHU Chain:A ((31-292)) | ---------------------------------------------KIPKNPSKVV---------ILDLGILDTFDALKLNDKVVGVPAKNLPKYLQQFKNKPSVGGVQQVDFEAINALKPDLIIISGRQSKFYDKLKEIAPTLFVGLDNANFLSSFENNVLSVAKLYGLEKEALEKISDIKNEIEKAK----SIVDEDKKALIILTNSNKISAFGPQSRFG----IIHDVLGINAVDENIK----GK---SINSEFILEKNPDYIFVVDRNVILGNKERAQGILDNALVAKTKAAQNKKIIYLDPEYWYLASGNGLES-LKTMILEIKNAVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CHU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100948 for 1816 contacts (-55.6/contact) +
2D Compatibility (PS) -25315 + (NN) -12673 + (LL) 4412
1D Compatibility (HY) -17600 + (ID) 3850
Total energy: -155974.0 ( -85.89 by residue)
QMean score : 0.481
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